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    44 repositories

    • trompy

      Public
      Collection of tools for plotting and data analysis from McCutcheon Lab in Tromsø
      Jupyter Notebook
      •
      MIT License
      •0•1•9•4•Updated Mar 30, 2026Mar 30, 2026

    • Lick-Calc-GUI

      Public
      GUI to analyse lick data from Med Associates files
      Python
      •0•1•0•0•Updated Nov 13, 2025Nov 13, 2025

    • photogui

      Public
      GUIs for analysing photometry data
      Python
      •
      MIT License
      •0•0•1•0•Updated Oct 29, 2025Oct 29, 2025

    • fosquant

      Public
      Code for quantifiying Fos and trapped neurons
      Jupyter Notebook
      •
      MIT License
      •0•1•2•0•Updated Oct 25, 2025Oct 25, 2025

    • FED_RT

      Public
      Jupyter Notebook
      •
      Other
      •1•4•0•0•Updated Oct 21, 2025Oct 21, 2025

    • hislightg

      Public
      Analysis code for publication on the fluorescent histamine sensor, HisLightG.
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 4, 2025Jul 4, 2025

    • immediate-protein-pref

      Public
      Roff
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 10, 2025Mar 10, 2025

    • intermittent-protein

      Public
      Analysis code for intermittent protein experiment
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 4, 2024Sep 4, 2024

    • niacin

      Public
      Jupyter Notebook
      •1•0•0•0•Updated Feb 29, 2024Feb 29, 2024

    • MACHINE_LEARNING_TOOLS

      Public
      In this repository we store and share scripts, data, training models, etc used for tracking or evaluating behavioural videos via DLC, SIMBA and other potential …
      machinelearningdeeplabcutbehavioural-tracking
      machinelearningdeeplabcutbehavioural-tracking
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Feb 21, 2024Feb 21, 2024

    • process2p

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•1•0•Updated Nov 3, 2023Nov 3, 2023

    • fostrap

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jun 27, 2023Jun 27, 2023

    • home-projects

      Public
      fun projects at home with the boys
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 1, 2022Dec 1, 2022

    • lickcalcgui

      Public
      GUI for analysing lick microstructure in rodent experiments
      MIT License
      •0•0•0•0•Updated Apr 5, 2022Apr 5, 2022

    • PRPR

      Public
      Analysis for protein-restricted progressive ratio experiment (Chiaccherini et al 2022)
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Feb 9, 2022Feb 9, 2022

    • PPP_analysis

      Public
      Analysis code for PPP experiment
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated May 28, 2021May 28, 2021

    • anc-for-jas

      Public
      ANC analysis for John and Celia
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated May 19, 2021May 19, 2021

    • distraction-peters

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jul 29, 2020Jul 29, 2020

    • Photometry-GUI

      Public
      Python
      •0•0•0•0•Updated Jul 24, 2020Jul 24, 2020

    • PPP_video

      Public
      Video analysis of protein preference experiments from McCutcheon Lab
      Python
      •0•1•0•0•Updated Jun 3, 2020Jun 3, 2020

    • mch_eelke

      Public
      to analyse photometry from mch gcamp6 expt
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Apr 8, 2020Apr 8, 2020

    • quick-photo-analysis

      Public
      for notebook for quick analysis
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Mar 5, 2020Mar 5, 2020

    • functions-and-figures

      Public
      Useful functions and code/instructions for making figures
      Python
      •0•0•0•0•Updated Jan 16, 2020Jan 16, 2020

    • video-correction-for-dan

      Public
      Jupyter Notebook
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Jan 15, 2020Jan 15, 2020

    • THPH-lp

      Public
      Python
      •0•0•0•0•Updated Nov 3, 2019Nov 3, 2019

    • DPCP-Jaime

      Public
      Analysis that Jaime has conducted on DPCP data
      Jupyter Notebook
      •0•0•0•0•Updated Sep 27, 2019Sep 27, 2019

    • sinkala-cell

      Public
      Instructions ans files for the Sinkala Flow Cell
      GNU General Public License v3.0
      •0•0•1•0•Updated Sep 20, 2019Sep 20, 2019

    • IPP1

      Public
      To analyse IPP1 and produce figures for SSIB2018
      Python
      •0•0•0•0•Updated Aug 26, 2019Aug 26, 2019

    • dPP

      Public
      Analysis of dLight photometry studies
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Aug 2, 2019Aug 2, 2019

    • tdt-convert

      Public
      Files for converting TDT files to Matlab and Python
      Jupyter Notebook
      •2•2•0•0•Updated Aug 2, 2019Aug 2, 2019
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