This package contains code to launch GUIs for analysing photometry data. There are separate versions that handle data collected via Tucker Davis Technologies (TDT) systems and Neurophotometrics systems.
Code is maintained by James McCutcheon, Dept of Psychology, UiT The Arctic University of Norway.
The GUI has not been uploaded to pip yet but can be easily installed at the command line (e.g. at an Anaconda prompt).
python -m pip install git+https://github.com/mccutcheonlab/photogui.git
If it does not work make sure that you have git installed.
conda install git
Once installed the GUIs can be launched by starting a python session
python
and importing the package and running one of the following functions
>>> import photogui as pg
>>> pg.start_photo_gui()
or
>>> import photogui as pg
>>> pg.start_photo_gui_np()
If you want tips for how to use the GUIs you can include the option, quickstart=True, e.g.
>>> pg.start_photo_gui(quickstart=True)
If you are interested in the functions that are used to process signals then I encourage you to check out the trompy package where they can all be examined. This package can be installed via pip.
pip install trompy
Please email jmc010@uit.no to get instructions on how to properly cite this project.
You are welcome to contribute to the code via pull requests. Please have a look at the NLeSC guide for guidelines about software development.