Skip to content
@StatFunGen

StatFunGen

where statistical genetics converges with functional genomics

Popular repositories Loading

  1. xqtl-protocol xqtl-protocol Public

    Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium

    Jupyter Notebook 48 53

  2. pecotmr pecotmr Public

    Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.

    R 33 20

  3. colocboost colocboost Public

    R package implementing multi-context colocalization analysis method for molecular QTL and GWAS studies

    R 13 5

  4. statgen-primer statgen-primer Public

    Notes on the statistics background for statistical genetics trainees

    Jupyter Notebook 12 1

  5. susieR susieR Public archive

    Forked from stephenslab/susieR

    R package for "sum of single effects" regression, version 2.0

    R 4

  6. statgen-advanced statgen-advanced Public

    Notes on advanced statistical genetics topics focusing on intuition and modeling choices of methods

    Shell 4 1

Repositories

Showing 10 of 14 repositories
  • xqtl-protocol Public

    Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium

    StatFunGen/xqtl-protocol’s past year of commit activity
    Jupyter Notebook 48 MIT 53 72 (5 issues need help) 1 Updated Apr 9, 2026
  • pecotmr Public

    Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.

    StatFunGen/pecotmr’s past year of commit activity
    R 33 20 7 1 Updated Apr 7, 2026
  • colocboost Public

    R package implementing multi-context colocalization analysis method for molecular QTL and GWAS studies

    StatFunGen/colocboost’s past year of commit activity
    R 13 5 0 1 Updated Apr 6, 2026
  • StatFunGen/xQTL-AD-Loci-Explore’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Apr 2, 2026
  • xqtl-resources Public

    FunGen-xQTL resources navigation

    StatFunGen/xqtl-resources’s past year of commit activity
    Jupyter Notebook 1 MIT 11 0 0 Updated Mar 26, 2026
  • xqtl-paper Public

    FunGen-xQTL phase 1 manuscript

    StatFunGen/xqtl-paper’s past year of commit activity
    Jupyter Notebook 2 MIT 10 0 3 Updated Mar 19, 2026
  • statgen-primer Public

    Notes on the statistics background for statistical genetics trainees

    StatFunGen/statgen-primer’s past year of commit activity
    Jupyter Notebook 12 1 0 0 Updated Mar 16, 2026
  • mmcloud Public

    Utilities to manage jobs on MMCloud from MemVerge Inc

    StatFunGen/mmcloud’s past year of commit activity
    Python 0 MIT 7 1 0 Updated Mar 9, 2026
  • pixi-setup Public

    Default software packages installation on PC, Mac, HPC and cloud via pixi

    StatFunGen/pixi-setup’s past year of commit activity
    Python 1 MIT 3 2 0 Updated Feb 26, 2026
  • simxQTL Public

    In house simulation R package to support investigations of various QTL association methods

    StatFunGen/simxQTL’s past year of commit activity
    R 1 MIT 4 0 0 Updated Feb 17, 2026

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…

Most used topics

Loading…