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Stereoseq workflow in TMA

Status: Open.

#418 In STOmics/Stereopy;

· synatkeamsk opened on Mar 20, 2026

Which Python version to use?

Status: Open.

#416 In STOmics/Stereopy;

· vladimirkovacevic opened on Jan 30, 2026

single R annotation with GPU lacking confidence scores

Status: Open.

#411 In STOmics/Stereopy;

· vraghu90 opened on Jan 14, 2026

Installation of Stereopy >=1.6.0 using Conda

Status: Open.

#410 In STOmics/Stereopy;

· ViHammer opened on Jan 8, 2026

Installation Failure - No such file or directory: 'requirements.txt'

Status: Open.

#409 In STOmics/Stereopy;

· patrickCNMartin opened on Dec 17, 2025

Would it be possible to add gene_name_index parameter to read_h5ad function?

Status: Open.

#408 In STOmics/Stereopy;

· shen-lanlan opened on Dec 12, 2025

Question about plt.paga_time_series_plot Parameters

cursor-fixfix issue by cursor automations&agentfix issue by cursor automations&agent

Status: Open.

#401 In STOmics/Stereopy;

· WangyangLiu-Bio opened on Oct 13, 2025

Request for RTX 5070 GPU Support and CUDA 12.x Compatibility

cursor-fixfix issue by cursor automations&agentfix issue by cursor automations&agent

Status: Open.

#399 In STOmics/Stereopy;

· Crazylittleape opened on Sep 23, 2025

High RAM usage and lack of multi-GPU support in spatial_alignment

cursor-fixfix issue by cursor automations&agentfix issue by cursor automations&agent

Status: Open.

#396 In STOmics/Stereopy;

· Yifan-Mo opened on Aug 25, 2025

gefpy version issue

Status: Open.

#395 In STOmics/Stereopy;

· nsohail19 opened on Aug 6, 2025

about generate_loom func

Status: Open.

#394 In STOmics/Stereopy;

· tonitsk-8264 opened on Aug 6, 2025

About the time consumption of umap for integrated data

cursor-fixfix issue by cursor automations&agentfix issue by cursor automations&agent

Status: Open.

#393 In STOmics/Stereopy;

· CCprinc opened on Jul 31, 2025