Replace System.out/err.println with logging in analysis and test code#332

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Copilot wants to merge 6 commits intomasterfrom

copilot/fix-331

Commits on Sep 23, 2025

Initial plan
Copilot
committed
Replace System.out/err.println with logging in analysis and ML files (part 1)

Copilot
and
khatchad
committed
Replace System.out/err.println with logging in parsers and callgraph files (part 2)

Copilot
and
khatchad
committed
Replace System.out/err.println with logging in loaders and analysis engines (part 3)

Copilot
and
khatchad
committed
Replace System.out/err.println with logging in remaining analysis files (part 4)

Copilot
and
khatchad
committed
Refactor test files to use logging instead of System.out/err.println

Copilot
and
khatchad
committed