Identify and quantify MHC eluted peptides from mass spectrometry raw data

DL model to predict HLA peptide presentation

Foundation model for MHC class I peptide binding prediction built on deep contrastive learning.

A pythonic library for analysing immunopeptidomic experiments

PepQueryMHC: Rapid and Comprehensive Tumor Antigen Prioritization from Immunopeptidomics Data

An optimized rescoring pipeline for immunopeptidomics data

Peptides motif search tool and Source protein mappers

R codes for processing MS data

A rescoring module for DIA-NN identifications

Visualization of Immunopeptides Mapped to Source Proteins Across Multiple Samples