RNA-seq analyses.
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Updated
Jul 29, 2025 - Shell
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gene-quantification
Here are 3 public repositories matching this topic...
Comprehensive bioinformatics workflow for RNA-seq quality control, trimming, alignment, and gene quantification. Automates the complete pipeline from raw FASTQ to gene expression counts using FastQC, FASTP, HISAT2, and featureCounts.
bioinformatics quality-control rna-seq bioinformatics-pipeline hisat2 bash-scripting fastqc bioinformatics-tool gene-quantification
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Updated
Mar 2, 2026 - Shell
qPCR Plate Planner is a browser-based tool to streamline the design, execution, and analysis of qPCR experiments. Supporting chromatin profiling, gene expression, and comparative assays, it integrates automated ΔΔCt calculations, statistical testing (t-test/ANOVA), and intelligent outlier detection to deliver standardized data quantification
epigenetics workflow-automation experimental-design qpcr-analysis gene-quantification master-mix plate-layout-design cut-and-run workflow-automation-tools fold-change-analysis chip-qpcr 384-well ddct-analysis chromatin-enrichment
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Updated
Mar 4, 2026 - HTML
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