SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.
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Updated
Sep 23, 2025 - R
SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.
Rewrite the LOUPE library (https://github.com/antoine77340/LOUPE) into Keras version. Many learnable pooling or differentiable aggregation methods are covered. (NetVLAD, NetRVLAD, SoftDBoW, NetFV, CG)
Mixture of Experts from scratch
Official implementation of GateNet
Bundle of Useful scRNA-seq Gating Tools Extending seuRat
Model from Tsuda B, Tye KM, Siegelmann HT, Sejnowski TJ. A modeling framework for adaptive lifelong learning with transfer and savings through gating in the prefrontal cortex. Proceedings of the National Academy of Sciences, 117 (47), 29872-29882, 2020. https://doi.org/10.1073/pnas.2009591117
Part I : 3D Object Detection with Waymo Dataset and Complex YOLO; Part II: Sensor Fusion(camera and lidar) using EKF and tracking
Gated-ViGAT. Code and data for our paper: N. Gkalelis, D. Daskalakis, V. Mezaris, "Gated-ViGAT: Efficient bottom-up event recognition and explanation using a new frame selection policy and gating mechanism", IEEE International Symposium on Multimedia (ISM), Naples, Italy, Dec. 2022.
Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation
Superfluid stream gating authorization tool
A small JavaScript library based on state machines (but not entirely) for isolating and managing its own UI-state (transient / non-persisted) layer while controlling a Domain-state (non-transient / persisted) layer like Redux, Radixx
SLM-as-Cerebellum for LLM Policy Enforcement - biologically-inspired GO/NO-GO gating
Yet another Verilog static analyzer
Wavelet filtering to enhance EEG signal-to-noise ratio for neural gating analyses. Includes comparisons with traditional ERP methods and exploration of predictive pre-stimulus markers.
GASP: Gated Attention for Saliency Prediction (IJCAI-21)
GosiLang - The World First Polyglot Programming Language
Code for GUI visualization of data, for import of GuavaMuse .FCS files, for flow cytometry style gating, and for calculating enrichment and depletion after a given procedure.
A production-grade pre-execution authority layer that binds AI agent identity to deterministic state. Standard IdPs (Entra ID, Okta, OIDC) issue passport to your Agent, predicate-authority issues/revokes "work permit" to your Agent based on intent & state
Contains MATLAB scripts used by members of the Glass Lab at UC Berkeley to analyze flow cytometry data.
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