ImageJ macro for the analysis of foci (e.g. DNA damage) in nuclei/cells
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Dec 9, 2025 - ImageJ Macro
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dna-damage
Here are 11 public repositories matching this topic...
Exploration, clustering, visualization and classification of DNA damage patterns
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Jan 15, 2021 - R
TOPAS application for simulating clustered DNA damage
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Sep 9, 2025 - C++
Toolkit for concretely describing non-canonical DNA, RNA, and proteins
dna methylation epigenetics protein rna phosphorylation dna-damage proteoform post-transcriptional-regulation post-translational-modification crosslinks
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Oct 5, 2020 - Python
Mechanistic Pan-Cancer Signaling Model
cell-cycle sbml proliferation dna-damage cell-biology mcf10a quantitative-systems-pharmacology apoptosis amici cancer-cell antimony mechanistic-modeling
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Feb 17, 2025 - Jupyter Notebook
Python interface to detect and quantify intranuclear proteins
python bioinformatics detection pyqt5 pypi image-processing python3 sqlite3 quantification digital-image-processing dna-damage skimage immunofluorescence
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Jan 27, 2026 - Python
Method to map double strand break repair scars at defined loci
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Jan 2, 2023 - Python
A jupyter notebook about DNA double strand break analysis from fluorescence images using Python
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Feb 18, 2019 - Jupyter Notebook
p53/p21 dynamics encode DNA damage and shape proliferation heterogeneity (Comms Biology 2023)
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Mar 9, 2026 - Python
Automated kinetics analysis of DNA repair protein recruitment at laser-induced damage sites from timelapse fluorescence microscopy
python image-analysis microscopy dna-damage bioimage-analysis quantitative-biology xrcc1 cell-nucleus
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Mar 8, 2026 - Jupyter Notebook
This repository includes all codes that were used to model or optimize models made for p53P and p21 after irradiation damage
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Jul 2, 2024
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