v0.0.12.post0

What's Changed

• ci(pre-commit.ci): autoupdate by @pre-commit-ci[bot] in #134

Full Changelog: v0.0.12...v0.0.12.post0

v0.0.12

What's Changed

• ci(pre-commit.ci): autoupdate by @pre-commit-ci[bot] in #111
• ci(pre-commit.ci): autoupdate by @pre-commit-ci[bot] in #115
• ci(dependabot): bump actions/checkout from 4 to 5 by @dependabot[bot] in #116
• ci(dependabot): bump actions/download-artifact from 4 to 5 by @dependabot[bot] in #117
• tests: allow to work without internet by @tlambert03 in #120
• fix: support upscaling output space by @tlambert03 in #121
• fix: Aggregation of fluorphores in ground truth with multiple samples by @melisande-c in #131
• Combined ci updates by @tlambert03 in #132

Full Changelog: v0.0.11...v0.0.12

v0.0.11

What's Changed

• feat: Better logging by @tlambert03 in #110

Full Changelog: v0.0.10...v0.0.11

v0.0.9

What's Changed

• ci(dependabot): bump codecov/codecov-action from 4 to 5 by @dependabot in #86
• ci(pre-commit.ci): autoupdate by @pre-commit-ci in #89
• refactor: add Camera.camera_type and other refactors by @tlambert03 in #91
• feat: LRU Caching for PSF, ability to set cache size with envvar by @melisande-c in #98
• Use uv for project setup by @tlambert03 in #100

New Contributors

• @melisande-c made their first contribution in #98

Full Changelog: v0.0.8...v0.0.9

v0.0.8

What's Changed

• allow any object with render method to be used for label distribution by @tlambert03 in #83
• refactor: change default spectral_bins_per_emission_channel and max_psf_radius_aus by @tlambert03 in #84
• ci(pre-commit.ci): autoupdate by @pre-commit-ci in #85

Full Changelog: v0.0.7...v0.0.8

v0.0.7

What's Changed

• ci(pre-commit.ci): autoupdate by @pre-commit-ci in #76
• feat: adding Identity PSF modality by @federico-carrara in #78
• feat: scaling each light source by the respective power by @federico-carrara in #79

Full Changelog: v0.0.6...v0.0.7

v0.0.6

What's Changed

• fix: allowing None type for 'CosemDataset' attributes by @federico-carrara in #67
• ci(pre-commit.ci): autoupdate by @pre-commit-ci in #60
• Fix cosem images download error by @veegalinova in #69
• Implementing Illumination/Irradiance as a (W, C, Z, Y, X) array by @federico-carrara in #63
• refactor: remove pint from models by @tlambert03 in #71
• ci(pre-commit.ci): autoupdate by @pre-commit-ci in #72
• fix: typos by @tlambert03 in #75
• refactor: rewrite simulation stages, improve optical config spectral considerations by @tlambert03 in #74
• fix: fix key again by @tlambert03 in #77

New Contributors

• @veegalinova made their first contribution in #69

Full Changelog: v0.0.5...v0.0.6

v0.0.5

What's Changed

• fix: fixed typo (from 'placemen' to 'placement') by @federico-carrara in #57
• add init_forbid_extra in pydantic.mypy settings by @tlambert03 in #58
• Documentation for excitation and emission code + a bug fix. by @ashesh-0 in #59
• fix: fix cosem fetch by @tlambert03 in #65

New Contributors

• @federico-carrara made their first contribution in #57

Full Changelog: v0.0.4...v0.0.5

v0.0.4

What's Changed

• fix: fix for redhat by @tlambert03 in #56

Full Changelog: v0.0.3...v0.0.4

v0.0.3

What's Changed

• feat: allow loading optical configs from fpbase, general refactor of optical configs by @tlambert03 in #40
• ci(pre-commit.ci): autoupdate by @pre-commit-ci in #42
• refactor: remove DataArray, use xarray directly, vendor xarray_jax from deepmind/graphcast by @tlambert03 in #43
• Establish dimension conventions, pass dimensions through more explicitly by @tlambert03 in #44
• docs: Overview of various stages. by @tlambert03 in #46
• feat: add caching by @tlambert03 in #41
• feat: add ndview convenience by @tlambert03 in #49
• feat: add cosem models, downloading, caching, binning, and tests by @tlambert03 in #50
• ci: try self-hosted for cupy by @tlambert03 in #45
• build: pin numpy to <2 until next tensorstore release by @tlambert03 in #51
• feat: support multi-channel, multi-fluorophore simulations by @ashesh-0 in #35
• feat: pull neuron ground truths from allen brain by @tlambert03 in #48
• fix: remove caching on bins by @tlambert03 in #53
• feat: cosem Sample by @tlambert03 in #18

New Contributors

• @ashesh-0 made their first contribution in #35

Full Changelog: v0.0.2...v0.0.3