python=3.7.4
pandas=0.25.1
scipy=1.3.1
numpy=1.17.2
cmapPy=4.0.1
numba=0.45.1
The CMAP data used for analysis can be downloaded from CMAP LINCS 2020.
The data from level5 were used.
The following files are needed:
- level5_beta_trt_cp_n720216x12328.gctx
- geneinfo_beta.txt
- siginfo_beta_cp.txt
- compoundinfo_beta.txt