specify · acwhite211 · Mar 17, 2026 · Mar 17, 2026 · Mar 17, 2026 · Mar 17, 2026
diff --git a/config/common/leaflet-layers.json b/config/common/leaflet-layers.json
@@ -0,0 +1,118 @@
+{
+  "baseMaps": {
+    "Street Map (OpenStreetMap)": {
+      "endpoint": "https://{s}.tile.openstreetmap.org/{z}/{x}/{y}.png",
+      "serverType": "tileServer",
+      "layerOptions": {
+        "maxZoom": 19,
+        "attribution": "&copy; <a href=\"https://www.openstreetmap.org/copyright\">OpenStreetMap</a> contributors"
+      },
+      "styles": [
+        "auto-dark-mode"
+      ]
+    },
+    "Street Map (ESRI)": {
+      "endpoint": "https://server.arcgisonline.com/ArcGIS/rest/services/World_Street_Map/MapServer/tile/{z}/{y}/{x}",
+      "serverType": "tileServer",
+      "layerOptions": {
+        "maxZoom": 23,
+        "attribution": "Esri, HERE, Garmin, USGS, Intermap, INCREMENT P, NRCan, Esri Japan, METI, Esri China (Hong Kong), Esri Korea, Esri (Thailand), NGCC, (c) OpenStreetMap contributors, and the GIS User Community"
+      },
+      "styles": [
+        "auto-dark-mode"
+      ]
+    },
+    "Topographic Map (ESRI)": {
+      "endpoint": "https://server.arcgisonline.com/ArcGIS/rest/services/World_Topo_Map/MapServer/tile/{z}/{y}/{x}",
+      "serverType": "tileServer",
+      "layerOptions": {
+        "maxZoom": 23,
+        "attribution": "Sources: Esri, HERE, Garmin, Intermap, increment P Corp., GEBCO, USGS, FAO, NPS, NRCAN, GeoBase, IGN, Kadaster NL, Ordnance Survey, Esri Japan, METI, Esri China (Hong Kong), (c) OpenStreetMap contributors, and the GIS User Community"
+      },
+      "styles": [
+        "auto-dark-mode"
+      ]
+    },
+    "Satellite Map (ESRI)": {
+      "endpoint": "https://server.arcgisonline.com/ArcGIS/rest/services/World_Imagery/MapServer/tile/{z}/{y}/{x}",
+      "serverType": "tileServer",
+      "layerOptions": {
+        "maxZoom": 23,
+        "attribution": "Tiles &copy; Esri &mdash; Source: Esri, i-cubed, USDA, USGS, AEX, GeoEye, Getmapping, Aerogrid, IGN, IGP, UPR-EGP, and the GIS User Community"
+      }
+    },
+    "Satellite Map (ESRI) (grayscale)": {
+      "endpoint": "https://server.arcgisonline.com/ArcGIS/rest/services/World_Imagery/MapServer/tile/{z}/{y}/{x}",
+      "serverType": "tileServer",
+      "layerOptions": {
+        "maxZoom": 23,
+        "attribution": "Tiles &copy; Esri &mdash; Source: Esri, i-cubed, USDA, USGS, AEX, GeoEye, Getmapping, Aerogrid, IGN, IGP, UPR-EGP, and the GIS User Community"
+      },
+      "styles": [
+        "grayscale"
+      ]
+    },
+    "Satellite Map (Géoportail/France)": {
+      "endpoint": "https://wxs.ign.fr/{apikey}/geoportail/wmts?REQUEST=GetTile&SERVICE=WMTS&VERSION=1.0.0&STYLE={style}&TILEMATRIXSET=PM&FORMAT={format}&LAYER=ORTHOIMAGERY.ORTHOPHOTOS&TILEMATRIX={z}&TILEROW={y}&TILECOL={x}",
+      "serverType": "tileServer",
+      "layerOptions": {
+        "attribution": "<a target=\"_blank\" href=\"https://www.geoportail.gouv.fr/\">Geoportail France</a>",
+        "bounds": [
+          [
+            -75,
+            -180
+          ],
+          [
+            81,
+            180
+          ]
+        ],
+        "minZoom": 2,
+        "maxZoom": 12,
+        "apikey": "choisirgeoportail",
+        "format": "image/jpeg",
+        "style": "normal"
+      }
+    },
+    "Satellite Map (USGS)": {
+      "endpoint": "https://basemap.nationalmap.gov/arcgis/rest/services/USGSImageryOnly/MapServer/tile/{z}/{y}/{x}",
+      "serverType": "tileServer",
+      "layerOptions": {
+        "maxZoom": 16,
+        "attribution": "Tiles courtesy of the <a href=\"https://usgs.gov/\">U.S. Geological Survey</a>"
+      }
+    },
+    "Live Satellite Map (NASA/GIBS)": {
+      "endpoint": "https://gibs.earthdata.nasa.gov/wmts/epsg3031/best/MODIS_Terra_CorrectedReflectance_TrueColor/default/{time}/{tilematrixset}/{z}/{y}/{x}.{format}",
+      "serverType": "tileServer",
+      "layerOptions": {
+        "attribution": "Imagery provided by services from the Global Imagery Browse Services (GIBS), operated by the NASA/GSFC/Earth Science Data and Information System (<a href=\"https://earthdata.nasa.gov\">ESDIS</a>) with funding provided by NASA/HQ.",
+        "bounds": [
+          [
+            -85.0511287776,
+            -179.999999975
+          ],
+          [
+            85.0511287776,
+            179.999999975
+          ]
+        ],
+        "minZoom": 1,
+        "maxZoom": 9,
+        "format": "jpg",
+        "time": "",
+        "tilematrixset": "250m"
+      }
+    }
+  },
+  "overlays": {
+    "Labels and boundaries": {
+      "endpoint": "https://esp.usdoj.gov/arcweb/rest/services/World_Boundaries_and_Places/MapServer/tile/{z}/{y}/{x}",
+      "serverType": "tileServer",
+      "layerOptions": {
+        "maxZoom": 23,
+        "attribution": "Esri, HERE, Garmin, (c) OpenStreetMap contributors, and the GIS user community"
+      }
+    }
+  }
+}
diff --git a/config/default_trees/2026_02_03_IMA_minerals.csv.gz b/config/default_trees/2026_02_03_IMA_minerals.csv.gz
diff --git a/config/default_trees/GeologicTimePeriod.csv.gz b/config/default_trees/GeologicTimePeriod.csv.gz
diff --git a/config/default_trees/col2008_aves.csv.gz b/config/default_trees/col2008_aves.csv.gz
diff --git a/config/default_trees/col2008_fishes.csv.gz b/config/default_trees/col2008_fishes.csv.gz
diff --git a/config/default_trees/col2008_herps.csv.gz b/config/default_trees/col2008_herps.csv.gz
diff --git a/config/default_trees/col2008_inverts.csv.gz b/config/default_trees/col2008_inverts.csv.gz
diff --git a/config/default_trees/col2008_mammalia.csv.gz b/config/default_trees/col2008_mammalia.csv.gz
diff --git a/config/default_trees/col2008_orthoptera.csv.gz b/config/default_trees/col2008_orthoptera.csv.gz
diff --git a/config/default_trees/col2008_poales.csv.gz b/config/default_trees/col2008_poales.csv.gz
diff --git a/config/default_trees/col2021_actinopterygii.csv.gz b/config/default_trees/col2021_actinopterygii.csv.gz
diff --git a/config/default_trees/col2021_amphibia_reptilia.csv.gz b/config/default_trees/col2021_amphibia_reptilia.csv.gz
diff --git a/config/default_trees/col2021_aves.csv.gz b/config/default_trees/col2021_aves.csv.gz
diff --git a/config/default_trees/col2021_bryophyta.csv.gz b/config/default_trees/col2021_bryophyta.csv.gz
diff --git a/config/default_trees/col2021_fungi.csv.gz b/config/default_trees/col2021_fungi.csv.gz
diff --git a/config/default_trees/col2021_mammalia.csv.gz b/config/default_trees/col2021_mammalia.csv.gz
diff --git a/config/default_trees/col2021_mollusca.csv.gz b/config/default_trees/col2021_mollusca.csv.gz
diff --git a/config/default_trees/col2021_mollusca.xlsx b/config/default_trees/col2021_mollusca.xlsx
diff --git a/config/default_trees/col2021_polypodiopsida.csv.gz b/config/default_trees/col2021_polypodiopsida.csv.gz
diff --git a/config/default_trees/col2021_tracheophyta.csv.gz b/config/default_trees/col2021_tracheophyta.csv.gz
diff --git a/config/default_trees/geonames.csv.gz b/config/default_trees/geonames.csv.gz
diff --git a/config/default_trees/mapping_files/2026_02_03_IMA_minerals.json b/config/default_trees/mapping_files/2026_02_03_IMA_minerals.json
@@ -0,0 +1,21 @@
+{
+	"all_columns": ["Mineral Name","Mineral Name (plain)","Valence Chemistry","IMA Chemistry","IMA Number","Country of Type Locality","IMA Status","isMineral"],
+	"root": {
+		"name": "Root"
+	},
+	"ranks": [
+		{
+			"name": "Minerals",
+			"rank": 10,
+			"column": "Mineral Name",
+			"fields": {
+				"name": "Mineral Name (plain)",
+                "text10": "Valence Chemistry",
+                "text14": "IMA Chemistry",
+                "text12": "IMA Number",
+                "text13": "Country of Type Locality",
+                "text11": "IMA Status"
+			}
+		}
+	]
+}
diff --git a/config/default_trees/mapping_files/col2021_actinopterygii.json b/config/default_trees/mapping_files/col2021_actinopterygii.json
@@ -0,0 +1,94 @@
+{
+    "all_columns": [
+        "kingdom",
+        "phylum",
+        "class",
+        "order",
+        "family",
+        "genus",
+        "species",
+        "subspecies",
+        "family common name",
+        "species author",
+        "species source",
+        "species common name",
+        "subspecies author",
+        "subspecies source",
+        "subspecies common name"
+    ],
+    "ranks": [
+        {
+            "name": "Kingdom",
+            "rank": 10,
+            "column": "kingdom",
+            "fields": {
+                "name": "kingdom"
+            }
+        },
+        {
+            "name": "Phylum",
+            "rank": 30,
+            "column": "phylum",
+            "fields": {
+                "name": "phylum"
+            }
+        },
+        {
+            "name": "Class",
+            "rank": 60,
+            "column": "class",
+            "fields": {
+                "name": "class"
+            }
+        },
+        {
+            "name": "Order",
+            "rank": 100,
+            "column": "order",
+            "fields": {
+                "name": "order"
+            }
+        },
+        {
+            "name": "Family",
+            "rank": 140,
+            "column": "family",
+            "fields": {
+                "name": "family"
+            }
+        },
+        {
+            "name": "Genus",
+            "rank": 180,
+            "column": "genus",
+            "infullname": true,
+            "fields": {
+                "name": "genus"
+            }
+        },
+        {
+            "name": "Species",
+            "rank": 220,
+            "column": "species",
+            "infullname": true,
+            "fields": {
+                "name": "species",
+                "author": "species author",
+                "source": "species source",
+                "commonname": "species common name"
+            }
+        },
+        {
+            "name": "Subspecies",
+            "rank": 230,
+            "column": "subspecies",
+            "infullname": true,
+            "fields": {
+                "name": "subspecies",
+                "author": "subspecies author",
+                "source": "subspecies source",
+                "commonname": "subspecies common name"
+            }
+        }
+    ]
+}
diff --git a/config/default_trees/mapping_files/col2021_amphibia_reptilia.json b/config/default_trees/mapping_files/col2021_amphibia_reptilia.json
@@ -0,0 +1,94 @@
+{
+    "all_columns": [
+        "kingdom",
+        "phylum",
+        "class",
+        "order",
+        "family",
+        "genus",
+        "species",
+        "subspecies",
+        "family common name",
+        "species author",
+        "species source",
+        "species common name",
+        "subspecies author",
+        "subspecies source",
+        "subspecies common name"
+    ],
+    "ranks": [
+        {
+            "name": "Kingdom",
+            "rank": 10,
+            "column": "kingdom",
+            "fields": {
+                "name": "kingdom"
+            }
+        },
+        {
+            "name": "Phylum",
+            "rank": 30,
+            "column": "phylum",
+            "fields": {
+                "name": "phylum"
+            }
+        },
+        {
+            "name": "Class",
+            "rank": 60,
+            "column": "class",
+            "fields": {
+                "name": "class"
+            }
+        },
+        {
+            "name": "Order",
+            "rank": 100,
+            "column": "order",
+            "fields": {
+                "name": "order"
+            }
+        },
+        {
+            "name": "Family",
+            "rank": 140,
+            "column": "family",
+            "fields": {
+                "name": "family"
+            }
+        },
+        {
+            "name": "Genus",
+            "rank": 180,
+            "column": "genus",
+            "infullname": true,
+            "fields": {
+                "name": "genus"
+            }
+        },
+        {
+            "name": "Species",
+            "rank": 220,
+            "column": "species",
+            "infullname": true,
+            "fields": {
+                "name": "species",
+                "author": "species author",
+                "source": "species source",
+                "commonname": "species common name"
+            }
+        },
+        {
+            "name": "Subspecies",
+            "rank": 230,
+            "column": "subspecies",
+            "infullname": true,
+            "fields": {
+                "name": "subspecies",
+                "author": "subspecies author",
+                "source": "subspecies source",
+                "commonname": "subspecies common name"
+            }
+        }
+    ]
+}