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Using TCGAbiolinks to getTCGA data#14

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tiagochst wants to merge 1857 commits intolijingya:masterfrom
tiagochst:master
Open

Using TCGAbiolinks to getTCGA data#14
tiagochst wants to merge 1857 commits intolijingya:masterfrom
tiagochst:master

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@tiagochst
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This is an update to:

  • Use TCGAbiolinks to download TCGA data
  • The vignette was transformed to be in html
  • Changed some of parallelization codes to be cleaner

@tiagochst tiagochst force-pushed the master branch 3 times, most recently from c0aecc1 to 7636699 Compare November 18, 2016 16:59
jwokaty and others added 24 commits November 1, 2022 11:11
Merge branch 'master' into devel

# Conflicts:
#	DESCRIPTION
#	R/Main_function.R
#	R/StatisticTest.R
#	inst/rmd/template.Rmd
#	man/get.TFs.Rd
#	man/get.enriched.motif.Rd
#	man/render_report.Rd
#	vignettes/analysis_diff_meth.Rmd
#	vignettes/analysis_get_pair.Rmd
#	vignettes/analysis_motif_enrichment.Rmd
#	vignettes/analysis_regulatory_tf.Rmd
#	vignettes/plots_TF.Rmd
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4 participants