v0.10.3

0.10.3 (2026-03-05)

Bug Fixes

• replace None with pd.NA in MPRAData allele processing for improv… (1c724b2)
• replace None with pd.NA in MPRAData allele processing for improved compatibility (8ec5372)

v0.10.2

0.10.2 (2026-03-04)

Bug Fixes

• replace None with pd.NA in variant map processing for better compatibility (#98) (c58769a)

v0.10.1

0.10.1 (2026-03-03)

Bug Fixes

• remove pysam library for better compatibility (#96) (8e92c38)

v0.10.0

0.10.0 (2026-03-02)

⚠ BREAKING CHANGES

• modification of normalization (over total counts not average per barcode per oligo) (#87)

Bug Fixes

• modification of normalization (over total counts not average per barcode per oligo) (#87) (9c00463)

v0.9.1

0.9.1 (2026-01-08)

Documentation

• overview update (83bb09e)
• quickstart and other improvements (66a2771)
• update quictstart and minor other updates (36622f7)
• Zenodo link and documentation update (5e4c62d)

v0.9.0

0.9.0 (2025-09-16)

⚠ BREAKING CHANGES

• Renames cli sequence_design to combine (#79)
• Some othere CLI commands changed (#75)
• Normalization only done on raw or sampled counts. Var filter (barcode filter) not used (#78)

Bug Fixes

• validate empty files as invalid (1fddaeb)

Features

• Normalization only done on raw or sampled counts. Var filter (barcode filter) not used (#78)
• Outlier detection is now in line with the manuscript (#75)

v0.8.2

0.8.2 (2025-07-01)

Features

• improved cli get reporter genomic elements/variants (044b2a5)

Bug Fixes

• chromosome maps with X and Y (0becc21)
• chromosome_map can distiguish between hg19 and hg38 (dd8afe5)

v0.8.1

0.8.1 (2025-06-27)

Bug Fixes

• correctly defining extra data in pyproject.toml (#69) (9e0a09d)

v0.8.0

0.8.0 (2025-06-27)

⚠ BREAKING CHANGES

• loading chro map files in source. requires python 3.9+ (#67)

Bug Fixes

• loading chro map files in source. requires python 3.9+ (#67) (5852748)

v0.7.4

0.7.4 (2025-06-26)

Bug Fixes

• correct header of count file (reporter experiment file format) (#65) (d8fe22d)