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Managlyph

GitHub tag (latest SemVer) build License: GPL v3

Overview

Managlyph is a desktop application for 3D visualization of atomic and molecular structures.

The application supports stereoscopic rendering via red/cyan anaglyph projection and interlaced output for compatible 3D displays. Typical use cases include classroom demonstrations, self-study, and interactive exploration of molecular models.

Documentation and Downloads

Capabilities

Stereoscopic Rendering

Managlyph provides red/cyan anaglyph rendering and interlaced stereo output. These modes are intended for use with either anaglyph glasses or supported 3D monitors/projectors.

red/cyan stereographic projection

ABO File Support and Molecular Orbitals

Managlyph uses the Atom Bond Object (ABO) format to store atomistic structures and related metadata. ABO datasets can include molecular geometries, bonding information, and molecular-orbital isosurfaces for visualization.

molecular orbitals

Atomic Orbitals

The application can generate and render atomic orbitals up to the 4f subshell, including rotation and inspection in 3D.

atomic orbitals

Reaction Pathway Visualization

Managlyph can visualize elementary reaction pathways by interpolating between structures (for example: reactants, intermediates, transition states, and products). This allows stepwise inspection of geometry changes during a reaction.

reaction pathway

Project Support

Development of Managlyph received financial support from the TU/e Boost program: https://boost.tue.nl/projects/3d-visualization-with-artificial-intelligence-and-projection/