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chore(deps): bump the all-dependencies group across 1 directory with 6 updates#226
hzhangxyz merged 1 commit intomainfrom
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Bumps the all-dependencies group with 6 updates in the / directory:

Package From To
numpy 2.4.3 2.4.4
pybind11 3.0.2 3.0.3
mypy 1.19.1 1.20.0
pytest 9.0.2 9.0.3
ruff 0.15.8 0.15.9
types-pyyaml 6.0.12.20250915 6.0.12.20260408

Updates numpy from 2.4.3 to 2.4.4

Release notes

Sourced from numpy's releases.

2.4.4 (Mar 29, 2026)

NumPy 2.4.4 Release Notes

The NumPy 2.4.4 is a patch release that fixes bugs discovered after the 2.4.3 release. It should finally close issue #30816, the OpenBLAS threading problem on ARM.

This release supports Python versions 3.11-3.14

Contributors

A total of 8 people contributed to this release. People with a "+" by their names contributed a patch for the first time.

  • Charles Harris
  • Daniel Haag +
  • Denis Prokopenko +
  • Harshith J +
  • Koki Watanabe
  • Marten van Kerkwijk
  • Matti Picus
  • Nathan Goldbaum

Pull requests merged

A total of 7 pull requests were merged for this release.

  • #30978: MAINT: Prepare 2.4.x for further development
  • #31049: BUG: Add test to reproduce problem described in #30816 (#30818)
  • #31052: BUG: fix FNV-1a 64-bit selection by using NPY_SIZEOF_UINTP (#31035)
  • #31053: BUG: avoid warning on ufunc with where=True and no output
  • #31058: DOC: document caveats of ndarray.resize on 3.14 and newer
  • #31079: TST: fix POWER VSX feature mapping (#30801)
  • #31084: MAINT: numpy.i: Replace deprecated sprintf with snprintf...
Commits
  • be93fe2 Merge pull request #31090 from charris/prepare-2.4.4
  • f5245dc REL: Prepare for the NumPy 2.4.4 release
  • 02e838b Merge pull request #31084 from charris/backport-31056
  • fa74b2d MAINT: numpy.i: Replace deprecated sprintf with snprintf (#31056)
  • 533a6db Merge pull request #31079 from charris/backport-20801
  • 9e496cb TST: fix POWER VSX feature mapping (#30801)
  • 8052c4b Merge pull request #31058 from charris/backport-31021
  • 7f13b5a MAINT: Skip test on PyPy.
  • 4c5fdd6 MAINT: Remove unused import of tracemalloc.
  • a3ca5ed Update numpy/_core/src/multiarray/shape.c
  • Additional commits viewable in compare view

Updates pybind11 from 3.0.2 to 3.0.3

Release notes

Sourced from pybind11's releases.

Version 3.0.3

Bug fixes:

  • Fixed TSS key exhaustion in implicitly_convertible() when many implicit conversions are registered across large module sets. #6020

  • Fixed heap-buffer-overflow in pythonbuf with undersized buffers by enforcing a minimum buffer size. #6019

  • Fixed virtual-inheritance pointer offset crashes when dispatching inherited methods through virtual bases. #6017

  • Fixed free(): invalid pointer crashes during interpreter shutdown with py::enum_<> by duplicating late-added def_property_static argument strings. #6015

  • Fixed function_record heap-type deallocation to call PyObject_Free() and decref the type. #6010

  • Hardened PYBIND11_MODULE_PYINIT and get_internals() against module-initialization crashes. #6018

  • Fixed static_pointer_cast build failure with virtual inheritance in holder_caster_foreign_helpers.h. #6014

  • Fixed ambiguous factory template specialization that caused compilation failures with nvcc + GCC 14. #6011

  • Fixed crash in def_readwrite for non-smart-holder properties of smart-holder classes. #6008

  • Fixed memory leak for py::dynamic_attr() objects on Python 3.13+ by clearing managed __dict__ contents during deallocation. #5999

  • Fixed binding of noexcept and ref-qualified (&, &&) methods inherited from unregistered base classes. #5992

Internal:

  • Moved tomlkit dependency to the dev dependency group. #5990

  • Switched to newer public CPython APIs (PyType_GetFlags and public vectorcall APIs where available). #6005

Tests:

  • Made an async callback test deterministic by replacing fixed sleep with bounded waiting. #5986

CI:

... (truncated)

Changelog

Sourced from pybind11's changelog.

Version 3.0.3 (March 31, 2026)

Bug fixes:

  • Fixed TSS key exhaustion in implicitly_convertible() when many implicit conversions are registered across large module sets. #6020

  • Fixed heap-buffer-overflow in pythonbuf with undersized buffers by enforcing a minimum buffer size. #6019

  • Fixed virtual-inheritance pointer offset crashes when dispatching inherited methods through virtual bases. #6017

  • Fixed free(): invalid pointer crashes during interpreter shutdown with py::enum_<> by duplicating late-added def_property_static argument strings. #6015

  • Fixed function_record heap-type deallocation to call PyObject_Free() and decref the type. #6010

  • Hardened PYBIND11_MODULE_PYINIT and get_internals() against module-initialization crashes. #6018

  • Fixed static_pointer_cast build failure with virtual inheritance in holder_caster_foreign_helpers.h. #6014

  • Fixed ambiguous factory template specialization that caused compilation failures with nvcc + GCC 14. #6011

  • Fixed crash in def_readwrite for non-smart-holder properties of smart-holder classes. #6008

  • Fixed memory leak for py::dynamic_attr() objects on Python 3.13+ by clearing managed __dict__ contents during deallocation. #5999

  • Fixed binding of noexcept and ref-qualified (&, &&) methods inherited from unregistered base classes. #5992

Internal:

  • Moved tomlkit dependency to the dev dependency group. #5990

  • Switched to newer public CPython APIs (PyType_GetFlags and public vectorcall APIs where available). #6005

Tests:

  • Made an async callback test deterministic by replacing fixed sleep with bounded waiting. #5986

... (truncated)

Commits
  • 1b49908 docs: add v3.0.3 and v3.1.0 changelog updates. (#6023)
  • c066c76 fix: add missing PYBIND11_ALWAYS_INLINE macro for v3.0.3 backports
  • 76efcb3 Bump version from v3.0.2 → v3.0.3
  • 0f41635 chore(deps): bump pygments from 2.17.2 to 2.20.0 in /docs (#6024)
  • 54a4615 chore(deps): bump requests from 2.32.4 to 2.33.0 in /docs (#6013)
  • d12037c chore(deps): update pre-commit hooks (#6002)
  • 64eecc4 chore(deps): bump the actions group with 3 updates (#6000)
  • c0ea8fc Fix heap-buffer-overflow in pythonbuf with undersized buffers (#6019)
  • 8d621d6 fix: detect virtual inheritance in add_base to prevent pointer offset crash (...
  • b6a616e fix: strdup "self" arg in def_property_static, partially revert #6010 (gh...
  • Additional commits viewable in compare view

Updates mypy from 1.19.1 to 1.20.0

Changelog

Sourced from mypy's changelog.

Mypy Release Notes

Next Release

Mypy 1.20

We’ve just uploaded mypy 1.20.0 to the Python Package Index (PyPI). Mypy is a static type checker for Python. This release includes new features, performance improvements and bug fixes. You can install it as follows:

python3 -m pip install -U mypy

You can read the full documentation for this release on Read the Docs.

Planned Changes to Defaults and Flags in Mypy 2.0

As a reminder, we are planning to enable --local-partial-types by default in mypy 2.0, which will likely be the next feature release. This will often require at least minor code changes. This option is implicitly enabled by mypy daemon, so this makes the behavior of daemon and non-daemon modes consistent.

Note that this release improves the compatibility of --local-partial-types significantly to make the switch easier (see below for more).

This can also be configured in a mypy configuration file (use False to disable):

local_partial_types = True

For more information, refer to the documentation.

We will also enable --strict-bytes by default in mypy 2.0. This usually requires at most minor code changes to adopt. For more information, refer to the documentation.

Finally, --allow-redefinition-new will be renamed to --allow-redefinition. If you want to continue using the older --allow-redefinition semantics which are less flexible (e.g. limited support for conditional redefinitions), you can switch to --allow-redefinition-old, which is currently supported as an alias to the legacy --allow-redefinition behavior. To use --allow-redefinition in the upcoming mypy 2.0, you can't use --no-local-partial-types. For more information, refer to the documentation.

Better Type Narrowing

Mypy's implementation of narrowing has been substantially reworked. Mypy will now narrow more aggressively, more consistently, and more correctly. In particular, you are likely to notice new narrowing behavior in equality expressions (==), containment expressions (in),

... (truncated)

Commits
  • 770d3ca Remove +dev from version
  • 4738ffa Changelog updates for 1.20 (#21109)
  • b4f07a7 Use 'native-parser' instead of 'native-parse' for optional dependency (#21115)
  • 7bec7b7 [mypyc] Document librt and librt.base64 (#21114)
  • c482596 --allow-redefinition-new is no longer experimental (#21110)
  • c916ca3 sdist: include misc/{diff-cache,apply-cache-diff}.py for `mypy/test/test_di...
  • b137e4e [mypyc] Speed up native-to-native imports within the same group (#21101)
  • 978b711 [mypyc] Fix range loop variable off-by-one after loop exit (#21098)
  • 67ada30 [stubtest] Check runtime availability of private types not marked `@type_chec...
  • bdef6ef librt cache tests: build respecting MYPY_TEST_PREFIX (#21097)
  • Additional commits viewable in compare view

Updates pytest from 9.0.2 to 9.0.3

Release notes

Sourced from pytest's releases.

9.0.3

pytest 9.0.3 (2026-04-07)

Bug fixes

  • #12444: Fixed pytest.approx which now correctly takes into account ~collections.abc.Mapping keys order to compare them.

  • #13634: Blocking a conftest.py file using the -p no: option is now explicitly disallowed.

    Previously this resulted in an internal assertion failure during plugin loading.

    Pytest now raises a clear UsageError explaining that conftest files are not plugins and cannot be disabled via -p.

  • #13734: Fixed crash when a test raises an exceptiongroup with __tracebackhide__ = True.

  • #14195: Fixed an issue where non-string messages passed to unittest.TestCase.subTest() were not printed.

  • #14343: Fixed use of insecure temporary directory (CVE-2025-71176).

Improved documentation

  • #13388: Clarified documentation for -p vs PYTEST_PLUGINS plugin loading and fixed an incorrect -p example.
  • #13731: Clarified that capture fixtures (e.g. capsys and capfd) take precedence over the -s / --capture=no command-line options in Accessing captured output from a test function <accessing-captured-output>.
  • #14088: Clarified that the default pytest_collection hook sets session.items before it calls pytest_collection_finish, not after.
  • #14255: TOML integer log levels must be quoted: Updating reference documentation.

Contributor-facing changes

  • #12689: The test reports are now published to Codecov from GitHub Actions. The test statistics is visible on the web interface.

    -- by aleguy02

Commits

Updates ruff from 0.15.8 to 0.15.9

Release notes

Sourced from ruff's releases.

0.15.9

Release Notes

Released on 2026-04-02.

Preview features

  • [pyflakes] Flag annotated variable redeclarations as F811 in preview mode (#24244)
  • [ruff] Allow dunder-named assignments in non-strict mode for RUF067 (#24089)

Bug fixes

  • [flake8-errmsg] Avoid shadowing existing msg in fix for EM101 (#24363)
  • [flake8-simplify] Ignore pre-initialization references in SIM113 (#24235)
  • [pycodestyle] Fix W391 fixes for consecutive empty notebook cells (#24236)
  • [pyupgrade] Fix UP008 nested class matching (#24273)
  • [pyupgrade] Ignore strings with string-only escapes (UP012) (#16058)
  • [ruff] RUF072: skip formfeeds on dedent (#24308)
  • [ruff] Avoid re-using symbol in RUF024 fix (#24316)
  • [ruff] Parenthesize expression in RUF050 fix (#24234)
  • Disallow starred expressions as values of starred expressions (#24280)

Rule changes

  • [flake8-simplify] Suppress SIM105 for except* before Python 3.12 (#23869)
  • [pyflakes] Extend F507 to flag %-format strings with zero placeholders (#24215)
  • [pyupgrade] UP018 should detect more unnecessarily wrapped literals (UP018) (#24093)
  • [pyupgrade] Fix UP008 callable scope handling to support lambdas (#24274)
  • [ruff] RUF010: Mark fix as unsafe when it deletes a comment (#24270)

Formatter

  • Add nested-string-quote-style formatting option (#24312)

Documentation

  • [flake8-bugbear] Clarify RUF071 fix safety for non-path string comparisons (#24149)
  • [flake8-type-checking] Clarify import cycle wording for TC001/TC002/TC003 (#24322)

Other changes

  • Avoid rendering fix lines with trailing whitespace after | (#24343)

Contributors

... (truncated)

Changelog

Sourced from ruff's changelog.

0.15.9

Released on 2026-04-02.

Preview features

  • [pyflakes] Flag annotated variable redeclarations as F811 in preview mode (#24244)
  • [ruff] Allow dunder-named assignments in non-strict mode for RUF067 (#24089)

Bug fixes

  • [flake8-errmsg] Avoid shadowing existing msg in fix for EM101 (#24363)
  • [flake8-simplify] Ignore pre-initialization references in SIM113 (#24235)
  • [pycodestyle] Fix W391 fixes for consecutive empty notebook cells (#24236)
  • [pyupgrade] Fix UP008 nested class matching (#24273)
  • [pyupgrade] Ignore strings with string-only escapes (UP012) (#16058)
  • [ruff] RUF072: skip formfeeds on dedent (#24308)
  • [ruff] Avoid re-using symbol in RUF024 fix (#24316)
  • [ruff] Parenthesize expression in RUF050 fix (#24234)
  • Disallow starred expressions as values of starred expressions (#24280)

Rule changes

  • [flake8-simplify] Suppress SIM105 for except* before Python 3.12 (#23869)
  • [pyflakes] Extend F507 to flag %-format strings with zero placeholders (#24215)
  • [pyupgrade] UP018 should detect more unnecessarily wrapped literals (UP018) (#24093)
  • [pyupgrade] Fix UP008 callable scope handling to support lambdas (#24274)
  • [ruff] RUF010: Mark fix as unsafe when it deletes a comment (#24270)

Formatter

  • Add nested-string-quote-style formatting option (#24312)

Documentation

  • [flake8-bugbear] Clarify RUF071 fix safety for non-path string comparisons (#24149)
  • [flake8-type-checking] Clarify import cycle wording for TC001/TC002/TC003 (#24322)

Other changes

  • Avoid rendering fix lines with trailing whitespace after | (#24343)

Contributors

... (truncated)

Commits
  • 724ccc1 Bump 0.15.9 (#24369)
  • 96d9e09 [ty] Move the deferred submodule inside infer/builder (#24368)
  • 130da28 [ty] Infer the extra_items keyword argument to class-based TypedDicts as an...
  • a617c54 [ty] Validate type qualifiers in functional TypedDict fields and the `extra_i...
  • d851708 [ty] Improve robustness of various type-qualifier-related checks (#24251)
  • aecb587 Only run the release-gate on workflow dispatch (#24366)
  • b889571 [ty] Use infer_type_expression for parsing parameter annotations and return...
  • 3286a62 Add a "release-gate" step to the release workflow (#24365)
  • 5f88756 Disallow starred expressions as values of starred expressions (#24280)
  • 5c59f8a [pyupgrade] Ignore strings with string-only escapes (UP012) (#16058)
  • Additional commits viewable in compare view

Updates types-pyyaml from 6.0.12.20250915 to 6.0.12.20260408

Commits

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@dependabot
chore(deps): bump the all-dependencies group across 1 directory with …
6e79586 
…6 updates

Bumps the all-dependencies group with 6 updates in the / directory:

| Package | From | To |
| --- | --- | --- |
| [numpy](https://github.com/numpy/numpy) | `2.4.3` | `2.4.4` |
| [pybind11](https://github.com/pybind/pybind11) | `3.0.2` | `3.0.3` |
| [mypy](https://github.com/python/mypy) | `1.19.1` | `1.20.0` |
| [pytest](https://github.com/pytest-dev/pytest) | `9.0.2` | `9.0.3` |
| [ruff](https://github.com/astral-sh/ruff) | `0.15.8` | `0.15.9` |
| [types-pyyaml](https://github.com/python/typeshed) | `6.0.12.20250915` | `6.0.12.20260408` |



Updates `numpy` from 2.4.3 to 2.4.4
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v2.4.3...v2.4.4)

Updates `pybind11` from 3.0.2 to 3.0.3
- [Release notes](https://github.com/pybind/pybind11/releases)
- [Changelog](https://github.com/pybind/pybind11/blob/master/docs/changelog.md)
- [Commits](pybind/pybind11@v3.0.2...v3.0.3)

Updates `mypy` from 1.19.1 to 1.20.0
- [Changelog](https://github.com/python/mypy/blob/master/CHANGELOG.md)
- [Commits](python/mypy@v1.19.1...v1.20.0)

Updates `pytest` from 9.0.2 to 9.0.3
- [Release notes](https://github.com/pytest-dev/pytest/releases)
- [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst)
- [Commits](pytest-dev/pytest@9.0.2...9.0.3)

Updates `ruff` from 0.15.8 to 0.15.9
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ruff@0.15.8...0.15.9)

Updates `types-pyyaml` from 6.0.12.20250915 to 6.0.12.20260408
- [Commits](https://github.com/python/typeshed/commits)

---
updated-dependencies:
- dependency-name: numpy
  dependency-version: 2.4.4
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: all-dependencies
- dependency-name: pybind11
  dependency-version: 3.0.3
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: all-dependencies
- dependency-name: mypy
  dependency-version: 1.20.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: all-dependencies
- dependency-name: pytest
  dependency-version: 9.0.3
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: all-dependencies
- dependency-name: ruff
  dependency-version: 0.15.9
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: all-dependencies
- dependency-name: types-pyyaml
  dependency-version: 6.0.12.20260408
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: all-dependencies
...

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@dependabot dependabot bot added dependencies Pull requests that update a dependency file python:uv Pull requests that update python:uv code labels Apr 8, 2026
@hzhangxyz hzhangxyz merged commit 4a4d5fe into main Apr 10, 2026
7 checks passed
@dependabot dependabot bot deleted the dependabot/uv/all-dependencies-3642731478 branch April 10, 2026 06:52
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