enHunter A pipeline to identify enhancer RNAs (eRNAs) from total RNA-seq data running enHunter on Terra see the /WDL for the .wdl scripts create Docker image using the scripts in /WDL/Docker. docker build --tag name /WDL/Docker/script/Dockerfile create Broad Methods Repository and import WDL script WDL scripts TNE_caller.wdl -- detects transcribed noncoding elements bam2bigwig.19.wdl -- converts alignment file (.bam) to normalized genomic coverage file (.bigwig) combine_bigwig.24.wdl -- combine bigwig for multiple samples from the same group star_splice_sites.wdl -- determine splice sites present in > 5 star junction files