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Röst Lab

Röst lab at U of T -- join us at https://gitter.im/Roestlab/Lobby

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  1. massdash massdash Public

    MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization

    HTML 22 3

  2. massformer massformer Public

    Tandem Mass Spectrum Prediction with Graph Transformers

    Python 100 33

  3. arycal arycal Public

    Forked from singjc/arycal

    ARYCAL: across run DIA-MS extracted ion chromatogram alignment written in Rust

    Rust 1

  4. redeem redeem Public

    Forked from singjc/redeem

    Repository for Deep Learning Models for Mass Spectrometry written in Rust

    Rust 1

  5. dia-pasef dia-pasef Public

    Scripts for DIA-Pasef

    Python 5 9

  6. DIAlignR DIAlignR Public

    This is a R package for alignment of DIA mass-spec data

    R 12 7

Repositories

Showing 10 of 27 repositories
  • pyprophet Public Forked from PyProphet/pyprophet

    PyProphet: Semi-supervised learning and scoring of OpenSWATH results.

    Roestlab/pyprophet’s past year of commit activity
    Python 0 BSD-3-Clause 21 1 1 Updated Mar 26, 2026
  • redeem Public Forked from singjc/redeem

    Repository for Deep Learning Models for Mass Spectrometry written in Rust

    Roestlab/redeem’s past year of commit activity
    Rust 1 BSD-3-Clause 2 0 0 Updated Feb 22, 2026
  • easypqp Public Forked from grosenberger/easypqp

    EasyPQP: Simple library generation for OpenSWATH

    Roestlab/easypqp’s past year of commit activity
    Python 0 BSD-3-Clause 14 0 0 Updated Feb 20, 2026
  • easypqp-rs Public Forked from singjc/easypqp-rs
    Roestlab/easypqp-rs’s past year of commit activity
    Rust 0 BSD-3-Clause 1 0 0 Updated Feb 19, 2026
  • risk Public

    RISK: a next-generation tool for biological network annotation and visualization

    Roestlab/risk’s past year of commit activity
    Python 1 GPL-3.0 0 0 0 Updated Feb 2, 2026
  • PythonProteomics Public

    A collection of available Python tools for Proteomics analysis

    Roestlab/PythonProteomics’s past year of commit activity
    67 MIT 13 0 0 Updated Jan 31, 2026
  • Roestlab/Labnotebook-Template’s past year of commit activity
    TeX 0 1 0 0 Updated Jan 31, 2026
  • DIAlignR Public

    This is a R package for alignment of DIA mass-spec data

    Roestlab/DIAlignR’s past year of commit activity
    R 12 7 2 1 Updated Jan 31, 2026
  • msproteomicstools Public Forked from msproteomicstools/msproteomicstools

    Some hopefully useful tools for mass spectrometry applied to proteomics

    Roestlab/msproteomicstools’s past year of commit activity
    Python 0 41 0 0 Updated Jan 31, 2026
  • dia-pasef Public

    Scripts for DIA-Pasef

    Roestlab/dia-pasef’s past year of commit activity
    Python 5 9 1 3 Updated Jan 31, 2026

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