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Emad-COMBINE-lab

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  1. GRouNdGAN GRouNdGAN Public

    A causal implicit generative model for simulating single-cell RNA-seq data guided by a gene regulatory network 🧬

    Python 39 5

  2. MARSY MARSY Public

    Code for the MARSY model with sample input and response. I included figures to show the architecture and format of input samples.

    Python 14

  3. pllm-ppi-data-leakage pllm-ppi-data-leakage Public

    Code and Data for "A flaw in using pre-trained pLLMs in protein-protein interaction inference models"

    Python 7 2

  4. InterpretableAI_for_DRP InterpretableAI_for_DRP Public

    Code to run interpretable pathway-based models

    Python 1

  5. CellPace-release CellPace-release Public

    CellPace: A temporal diffusion-forcing framework for simulation, interpolation and extrapolation of single-cell dynamics

    Python 1

  6. Emad-COMBINE-lab.github.io Emad-COMBINE-lab.github.io Public

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