COMBINE lab
COMputational BIology and Network Evolution lab
- 195 followers
- University of Maryland
- http://combine-lab.github.io
- combine.org@gmail.com
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alevin-fry
alevin-fry Public🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
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pufferfish
pufferfish PublicAn efficient index for the colored, compacted, de Bruijn graph
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cuttlefish
cuttlefish PublicBuilding the compacted de Bruijn graph efficiently from references or reads.
Repositories
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- cf1-rs Public
An subset of Cuttlefish 1, rewritten in Rust, to provide maximal unitigs and tiling information for piscem indexing.
COMBINE-lab/cf1-rs’s past year of commit activity - libradicl Public
COMBINE-lab/libradicl’s past year of commit activity - OUP-Bioinformatics-Typst Public
Unofficial attempt at a Typst template for the Oxford Bioinformatics journal
COMBINE-lab/OUP-Bioinformatics-Typst’s past year of commit activity
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