Adding anndata concatenation with bioalpha to main TileDB branch#116

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ariannalandini wants to merge 11 commits intotiledb_locusbreakerfrom

bioalpha_ad_concat

Commits on Oct 6, 2025

Using bioalpha for concatenating more than 100 anndatas
arianna.landini
committed
Fix typo
arianna.landini
committed
Using gpu for bioalpha
arianna.landini
committed

Commits on Oct 8, 2025

Forgot to load newly added module CONCAT_ANNDATA_BA
Arianna Landini
committed

Commits on Oct 16, 2025

Forgot about coverage in anndata obs
ariannalandini
authored
Making sure to remove actual values for SNPs outside of the extended cs
ariannalandini
authored
Add also function to fix var after concatenation
Arianna Landini
committed
Instead of setting to 0, actually filter out SNPs outside of cs - avoid having actual 0 values rather than sparse
ariannalandini
authored

Commits on Dec 4, 2025

Tidy up branches - adding OT to annData part into most updated TileDB using branch (#111)

authored

Commits on Jan 20, 2026