Skip to content

BDomzal/magnetstein_data

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

175 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Magnetstein data

all_components_variant_4

Data for Magnetstein paper & web application.

For more info about Magnetstein, go here.

Contents of this repository

The most important file here is estimation.py. This script contains the code for estimation of proportions for all the experiments (1-11).

Folders starting from the word experiment contain raw data, scripts used for preprocessing and preprocessed data.

Script spectra_visualisation.py contains code for creating visualisations (included in folder visualisations/).

Script AvRE_calculation.py contains code for computing averaged relative error.

Script default_parameters_search.py checks which values of parameters give the least overall error among all the experiments.

In folder heatmaps/ there are visualisations showing influence of $\kappa_{mixture}$ and $\kappa_{components}$ parameters on the quality of estimation.

Citing

If you use data from this repository, please cite:

Domżał, B., Nawrocka, E.K., Gołowicz, D., Ciach, M.A., Miasojedow, B., Kazimierczuk, K., & Gambin, A. (2023). Magnetstein: An Open-Source Tool for Quantitative NMR Mixture Analysis Robust to Low Resolution, Distorted Lineshapes, and Peak Shifts. Analytical Chemistry. DOI: 10.1021/acs.analchem.3c03594.