[pontikos@penicillin:~/phenopolis_install/ngs_transcript_plotter] python run_tests.py
/Users/pontikos/anaconda2/lib/python2.7/site-packages/matplotlib/font_manager.py:273: UserWarning: Matplotlib is building the font cache using fc-list. This may take a moment.
warnings.warn('Matplotlib is building the font cache using fc-list. This may take a moment.')
make_protein_domain_color_file
Traceback (most recent call last):
File "run_tests.py", line 15, in <module>
input_dir + "\\protein_domain_color.csv")
File "/Users/pontikos/phenopolis_install/ngs_transcript_plotter/ngs_transcript_plotter.py", line 28, in make_protein_domain_color_file
protein_domain_df = pds.get_protein_domain_df(protein_domain_file, transcript_l, database, sortby_col_l)
File "/Users/pontikos/phenopolis_install/ngs_transcript_plotter/protein_domains.py", line 36, in get_protein_domain_df
protein_domain_df_chunker = pd.read_csv(protein_domain_file, sep="\t", chunksize=1000)
File "/Users/pontikos/anaconda2/lib/python2.7/site-packages/pandas/io/parsers.py", line 562, in parser_f
return _read(filepath_or_buffer, kwds)
File "/Users/pontikos/anaconda2/lib/python2.7/site-packages/pandas/io/parsers.py", line 315, in _read
parser = TextFileReader(filepath_or_buffer, **kwds)
File "/Users/pontikos/anaconda2/lib/python2.7/site-packages/pandas/io/parsers.py", line 645, in __init__
self._make_engine(self.engine)
File "/Users/pontikos/anaconda2/lib/python2.7/site-packages/pandas/io/parsers.py", line 799, in _make_engine
self._engine = CParserWrapper(self.f, **self.options)
File "/Users/pontikos/anaconda2/lib/python2.7/site-packages/pandas/io/parsers.py", line 1213, in __init__
self._reader = _parser.TextReader(src, **kwds)
File "pandas/parser.pyx", line 358, in pandas.parser.TextReader.__cinit__ (pandas/parser.c:3427)
File "pandas/parser.pyx", line 628, in pandas.parser.TextReader._setup_parser_source (pandas/parser.c:6861)
IOError: File /Users/pontikos/phenopolis_install/ngs_transcript_plotter\APC_exoplot_domains_wt_overlaps.txt does not exist
