The matR argument was added as a way of referring to reproduction without specifying whether it was clonal or sexual.
So matR can be matF + matC , or just matF or just matC.
Its use is not well standardised across functions.
Functions that use matR
vr_vec_reproduction
vr_fecundity
vr_mat_R
net_repro_rate
mpm_collapse
gen_time
Functions that use matF and matC, and NOT matR
age_from_stage functions (mpm_to_hx etc.)
mpm_rearrange
mpm_standardise
The
matRargument was added as a way of referring to reproduction without specifying whether it was clonal or sexual.So
matRcan bematF+matC, or justmatFor justmatC.Its use is not well standardised across functions.
Functions that use
matRvr_vec_reproductionvr_fecundityvr_mat_Rnet_repro_ratempm_collapsegen_timeFunctions that use
matFandmatC, and NOTmatRage_from_stagefunctions (mpm_to_hxetc.)mpm_rearrangempm_standardise